• oats@piefed.zip
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    1 day ago

    Well actshly, rm removes the inode, not the file. If it’s still in use it’ll stay on the disk until the last fd is closed.

    • with most file systems that are usual on linux
    • DaGammla@lemmy.mlOP
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      1 day ago

      Yep, it’s a smart system.
      For the user, the file is immediately no longer in the tree, so for them it’s considered done.
      The OS should handle all the hassle, not the user.

      • oats@piefed.zip
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        1 day ago

        “I’ll get to it, eventually” would ruin the meme but be more fitting, in my opinion.

        Had multiple occasions where people fought against filling disks and just couldn’t see why. Well, that 10 gig log file you deleted two weeks ago? It’s 20 gig now, and still being written to.

        lsof shows stuff like that.

        • Redjard@reddthat.com
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          1 day ago

          Nothing new can open it immediately.
          So it’s effectively deleted with old references slowly phasing out.

          Zombie files are an issue though. A while back I had a huge zombie file on a tmpfs which was filling all my ram. So I built a tool to track it down and traced it to a konsole instance with a killed tab that previously had billions of lines of stdout history.

          https://github.com/redjard/zombie-file-list

          zombie-file-list

          Lists Linux files that are still opened in a process but were deleted. These “zombie files” use up space and inodes but are hard to find.

          I wrote this because my /tmp tmpfs was taking up 32GB of ram despite the files inside summing to only 3MB.

          Usage:

          zombie-file-list <path to filesystem>
          

          Note:

          • This command is designed to be run on filesystem roots, not paths in general.
          • Sizes are apparent sizes, e.g. on ext4 the actual sizes are rounded up to the next 4KiB
          • tal@lemmy.today
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            14 hours ago

            I wrote this because my /tmp tmpfs was taking up 32GB of ram despite the files inside summing to only 3MB.

            Note that tmpfs doesn’t force its contents to remain in memory — the kernel can move stuff there to swap space if it needs to do so.

            Ramfs is the filesystem that keeps things locked in memory:

            https://www.kernel.org/doc/Documentation/filesystems/ramfs-rootfs-initramfs.txt

            With ramfs, there is no backing store.  Files written into ramfs allocate
            dentries and page cache as usual, but there's nowhere to write them to.
            This means the pages are never marked clean, so they can't be freed by the
            VM when it's looking to recycle memory.
            

            ramfs and tmpfs:
            ----------------
            
            One downside of ramfs is you can keep writing data into it until you fill
            up all memory, and the VM can't free it because the VM thinks that files
            should get written to backing store (rather than swap space), but ramfs hasn't
            got any backing store.  Because of this, only root (or a trusted user) should
            be allowed write access to a ramfs mount.
            
            A ramfs derivative called tmpfs was created to add size limits, and the ability
            to write the data to swap space.  Normal users can be allowed write access to
            tmpfs mounts.  See Documentation/filesystems/tmpfs.txt for more information.
            
            • Redjard@reddthat.com
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              22 hours ago

              Maybe. It’s been a while so I don’t know 100% this was put to the test, but I wanna say the system has a weird kernel which leads to it not swapping out tmpfs properly.

              But ordinarily you should be right, this would simply ruin the stats visually until something forced it to swap out, since konsole shouldn’t be accessing it.

            • Redjard@reddthat.com
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              23 hours ago

              I could have, but the system wasn’t set up to restart without downtime, and the server was also remote and not easily accessible.
              It did acutally die due to a poweroutage some months later and took 2 days to get restarted.
              So yeah sometimes restarting is way more undesirable than loosing access to 32GB of ram. I would have just eaten that cost otherwise until a more opportune chance to restart.

              Besides, restarting to fix a problem is equivalent to giving up on understanding the issue, learning new stuff, and maybe finding a way better solution or preventing the type of error entirely.
              I get not finding the motivation when your software is working against you and learning is ultimately fruitless like on windows, or not having the time in the moment to figure it out properly, but a perfectly good bug on a linux system when you have time is prime real-estate to grow your skills and find fulfillment.

              • Dave@lemmy.nz
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                23 hours ago

                Ah that makes sense. I had considered it might be a server but you mentioned a Konsole tab so my mind decided it must have been local machine.

                Crazy it took 2 days to restart the server!

                • Redjard@reddthat.com
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                  22 hours ago

                  There was a dedicated person on call, but it happened to be when they were away.
                  The Konsole was left running from a local access, with a while true loop of a service status command. When that service was stopped later, the while loop started rerunning the script every second, filling the buffer with error messages.
                  The tab was then killed remotely, but the Konsole window left running. Process ram usage went down but the file remained on tmpfs, which is not counted as ram usage so wasn’t noticed.
                  Then it took some time to notice the ram usage mismatch so noone thought of that konsole incident.

    • tal@lemmy.today
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      14 hours ago

      You can also still access the file as long as there’s a process that still has it open. I have, in the past, “undeleted” a file or two doing that.

      $ echo foo > bar
      $ tail -f bar
      foo
      

      In another terminal:

      $ pidof tail
      1525534
      $ ls -l /proc/1525534/fd|grep bar
      lr-x------ 1 tal tal 64 Jun 16 06:42 3 -> /home/tal/bar
      $ rm bar
      $ ls -l /proc/1525534/fd|grep bar
      lr-x------ 1 tal tal 64 Jun 16 06:42 3 -> /home/tal/bar (deleted)
      $ cat /proc/1525534/fd/3
      foo
      $ cat /proc/1525534/fd/3 > bar-recovered
      $ cat bar-recovered
      foo
      $
      

      That is, the /proc entry for tail’s file descriptor 3 there looks kinda like a symlink, but the kernel doesn’t actually make it behave in quite the same way as a normal symlink.

      That being said, getting back to the original point about unlinking not being able to remove the directory entry…it won’t sit there blocking you from putting a new directory entry there with the same name, the way Windows file semantics mandate.

      EDIT: Also, what rm removes is the directory entry rather than the inode. The inode sticks around as long as the file data is there. You can have multiple directory entries for an inode, or none at all, but file data will have an inode associated with it.

      $ touch a
      $ sudo ln -T a b
      $ stat -c %i a
      216538023
      $ stat -c %i b
      216538023
      

      Same inode, different directory entries.

      https://en.wikipedia.org/wiki/Inode

      inode persistence and unlinked files

      An inode may have no links. An inode without links represents a file with no remaining directory entries or paths leading to it in the filesystem. A file that has been deleted or lacks directory entries pointing to it is termed an ‘unlinked’ file.

      Such files are removed from the filesystem, freeing the occupied disk space for reuse. An inode without links remains in the filesystem until the resources (disk space and blocks) freed by the unlinked file are deallocated or the file system is modified.

      Although an unlinked file becomes invisible in the filesystem, its deletion is deferred until all processes with access to the file have finished using it, including executable files which are implicitly held open by the processes executing them.

    • Do modern file systems actually remove it from disk? It’s been a while since I did any forensics and didn’t do much of it, but I remember being able to batch restore files from inodes as long as that part of the disk hadn’t been overwritten. That’s why you’re supposed to overwrite disks with random data if you want to data gone.

      • oats@piefed.zip
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        1 day ago

        Nah, they just throw away the block markings, absolutely.

        Overwriting a SSD is difficult as well, better encrypt the drive and trash the key when you decommission.

          • oats@piefed.zip
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            1 day ago

            You mean like in your kitchen? Too much metal, you’ll damage your magnetron.

            You could use thermite and melt it to a pulp. Dangerous as well, though.

            Really, just encrypt. Your CPU has AES extensions, performance impact is negligible. Simple, clean, and a protection against involuntary decommission as well.